MRC CoRE in Restorative Neural Dynamics

In Proceedings of the 36th AAAI Conference on Artificial Intelligence‚ AAAI 2022 ‚Vancouver, BC, Canada, February 22--March 1‚ 2022 (Vol. 10177, pp. 507-524). AAAI Press.

View PDF (2MB)

Patai EZ, Foltynie T, Limousin P, Akram H, Zrinzo L, Bogacz R, Litvak V

Conflict Detection in a Sequential Decision Task Is Associated with Increased Cortico-Subthalamic Coherence and Prolonged Subthalamic Oscillatory Response in the β Band.

2022. J Neurosci, 42(23):4681-4692.

Free Full Text at Europe PMC

PMC9186803

View PDF (3MB)

Möller M, Manohar S, Bogacz R

Uncertainty-guided learning with scaled prediction errors in the basal ganglia.

2022. PLoS Comput Biol, 18(5)e1009816.

Free Full Text at Europe PMC

PMC9182698

View PDF (2MB)

Weerasinghe G, Bogacz R

Patent Application: Deep brain stimulation

2022. WO/2022/029445

View PDF (4MB)

Lefebvre G, Summerfield C, Bogacz R

A Normative Account of Confirmation Bias During Reinforcement Learning.

2022. Neural Comput, 34(2):307-337.

Free Full Text at Europe PMC

PMC7612695

View PDF (4MB)

Zamora M, Meller S, Kajin F, Sermon JJ, Toth R, Benjaber M, Dijk DJ, Bogacz R, Worrell G, Valentin A, Duchet B, Volk HA, Denison T

Case Report: Embedding "Digital Chronotherapy" Into Medical Devices-A Canine Validation for Controlling Status Epilepticus Through Multi-Scale Rhythmic Brain Stimulation.

2021. Front Neurosci, 15:734265.

Free Full Text at Europe PMC

PMC8498587

View PDF (2MB)

Salvatori T, Song Y, Hong Y, Sha L, Frieder S, Xu Z, Bogacz R, Lukasiewicz T

Associative Memories via Predictive Coding.

2021. Adv. Neural Inf. Process Syst., 34:3874-3886.

Free Full Text at Europe PMC

PMC7612799

View PDF (3MB)

van Swieten MMH, Bogacz R, Manohar S

Hunger improves reinforcement-driven but not planned action.

2021. Cogn Affect Behav Neurosci, 21(6):1196-1206.

Free Full Text at Europe PMC

PMC8563670

View PDF (2MB)

Oswal A, Cao C, Yeh CH, Neumann WJ, Gratwicke J, Akram H, Horn A, Li D, Zhan S, Zhang C, Wang Q, Zrinzo L, Foltynie T, Limousin P, Bogacz R, Sun B, Husain M, Brown P, Litvak V

Neural signatures of hyperdirect pathway activity in Parkinson's disease.

2021. Nat Commun, 12(1):5185.

Free Full Text at Europe PMC

PMC8408177

View PDF (5MB)

Moeller M, Grohn J, Manohar S, Bogacz R

An association between prediction errors and risk-seeking: Theory and behavioral evidence.

2021. PLoS Comput Biol, 17(7)e1009213.

Free Full Text at Europe PMC

PMC8318232

View PDF (2MB)

Weerasinghe G, Duchet B, Bick C, Bogacz R

Optimal closed-loop deep brain stimulation using multiple independently controlled contacts

2021. PLoS Comput. Biol., 17(8):e1009281.

Free Full Text at Europe PMC

PMC8405008

View PDF (4MB)

Duchet B, Ghezzi F, Weerasinghe G, Tinkhauser G, Kühn AA, Brown P, Bick C, Bogacz R

Average beta burst duration profiles provide a signature of dynamical changes between the ON and OFF medication states in Parkinson's disease.

2021. PLoS Comput Biol, 17(7)e1009116.

Free Full Text at Europe PMC

PMC8263069

View PDF (5MB)

Duchet B, Weerasinghe G, Bick C, Bogacz R

Optimizing deep brain stimulation based on isostable amplitude in essential tremor patient models.

2021. J Neural Eng, 18(4):046023.

Free Full Text at Europe PMC

PMC7610712

View PDF (3MB)

Song Y, Lukasiewicz T, Xu Z, Bogacz R

Can the Brain Do Backpropagation? -Exact Implementation of Backpropagation in Predictive Coding Networks.

2020. Adv Neural Inf Process Syst, 33:22566-22579.

Free Full Text at Europe PMC

PMC7610561

View PDF (1MB)

Bogacz R

Dopamine role in learning and action inference.

2020. eLife, 9:e53262

Free Full Text at Europe PMC

PMC7392608

View PDF (2MB)

van Swieten MMH, Bogacz R

Modeling the effects of motivation on choice and learning in the basal ganglia.

2020. PLoS Comput. Biol., 16(5):e1007465.

Free Full Text at Europe PMC

PMC7274475

View PDF (2MB)

Duchet B, Weerasinghe G, Cagnan H, Brown P, Bick C, Bogacz R

Phase-dependence of response curves to deep brain stimulation and their relationship: from essential tremor patient data to a Wilson-Cowan model.

2020. J. Math. Neurosci., 10(1):4.

Free Full Text at Europe PMC

PMC7105566

View PDF (5MB)

Richards BA, Lillicrap TP, Beaudoin P, Bengio Y, Bogacz R, Christensen A, Clopath C, Costa RP, de Berker A, Ganguli S, Gillon CJ, Hafner D, Kepecs A, Kriegeskorte N, Latham P, Lindsay GW, Miller KD, Naud R, Pack CC, Poirazi P, Roelfsema P, Sacramento J, Saxe A, Scellier B, Schapiro AC, Senn W, Wayne G, Yamins D, Zenke F, Zylberberg J, Therien D, Kording KP

A deep learning framework for neuroscience.

2019. Nat. Neurosci., 22:1761-1770.

Free Full Text at Europe PMC

PMC7115933

View PDF (2MB)

Weerasinghe G, Duchet B, Cagnan H, Brown P, Bick C, Bogacz R

Predicting the effects of deep brain stimulation using a reduced coupled oscillator model.

2019. PLoS Comput. Biol., 15(8):e1006575.

Free Full Text at Europe PMC

PMC6701819

View PDF (3MB)

Möller M, Bogacz R

Learning the payoffs and costs of actions.

2019. PLoS Comput. Biol., 15(2):e1006285.

Free Full Text at Europe PMC

PMC6413954

View PDF (3MB)

Whittington JCR, Bogacz R

Theories of Error Back-Propagation in the Brain.

2019. Trends Cogn. Sci., 23, 235-250

Free Full Text at Europe PMC

PMC6382460

View PDF (3MB)

Moraud EM, Tinkhauser G, Agrawal M, Brown P, Bogacz R

Predicting beta bursts from local field potentials to improve closed-loop DBS paradigms in Parkinson’s patients

2018. Conf Proc IEEE Eng Med Biol Soc., 2018:3766-3769

Free Full Text at Europe PMC

PMC6277014

View PDF (2MB)

Cieślak PE, Ahn WY, Bogacz R, Rodriguez Parkitna J

Selective Effects of the Loss of NMDA or mGluR5 Receptors in the Reward System on Adaptive Decision-Making.

2018. eNeuro. 5(4):e0331-18.2018

Free Full Text at Europe PMC

PMC6175304

View PDF (3MB)

Malhotra G, Leslie DS, Ludwig CJ, Bogacz R

Time-varying decision boundaries: insights from optimality analysis.

2018.Psychon Bull Rev, 25(3):971-996.

Free Full Text at Europe PMC

PMC5990589

View PDF (3MB)

Leimbach F, Georgiev D, Litvak V, Antoniades C, Limousin P, Jahanshahi M, Bogacz R

Deep Brain Stimulation of the Subthalamic Nucleus Does Not Affect the Decrease of Decision Threshold during the Choice Process When There Is No Conflict, Time Pressure, or Reward.

2018.J Cogn Neurosci, 30(6):876-884.

Free Full Text at Europe PMC

PMC6037388

View PDF (1MB)

Groschner LN, Chan Wah Hak L, Bogacz R, DasGupta S, Miesenböck G

Dendritic Integration of Sensory Evidence in Perceptual Decision-Making.

2018. Cell, 173(4):894-905.

Free Full Text at Europe PMC

PMC5947940

View PDF (12MB)

Herz DM, Little S, Pedrosa D, Tinkhauser G, Cheeran B, Foltynie T, Bogacz R, Brown P

Mechanisms Underlying Decision-Making as Revealed by Deep-Brain Stimulation in Patients with Parkinson's Disease.

2018. Curr. Biol., 28(8):1169-1178.e6.

Free Full Text at Europe PMC

PMC5912902

View PDF (3MB)

Grogan J, Tsivos D, Smith L, Knight BE, Bogacz R, Whone AL, Coulthard EJ

Effects of dopamine on reinforcement learning and consolidation in Parkinson's disease.

2017. eLife;6:e26801

Free Full Text at Europe PMC

PMC5531832

View PDF (2MB)

Malhotra G, Leslie DS, Ludwig CJ, Bogacz R

Overcoming indecision by changing the decision boundary.

2017.J Exp Psychol Gen, 146(6):776-805.

Free Full Text at Europe PMC

PMC5459222

View PDF (4MB)

Gillies MJ, Hyam JA, Weiss AR, Antoniades CA, Bogacz R, Fitzgerald JJ, Aziz TZ, Whittington MA, Green AL

The Cognitive Role of the Globus Pallidus interna; Insights from Disease States.

2017.Exp Brain Res, 235(5):1455-1465.

Free Full Text at Europe PMC

PMC5380693

View PDF (4MB)

Whittington JCR, Bogacz R

An Approximation of the Error Backpropagation Algorithm in a Predictive Coding Network with Local Hebbian Synaptic Plasticity.

2017.Neural Comput, 29(5):1229-1262.

Free Full Text at Europe PMC

PMC5467749

View PDF (1MB)

Bogacz R

A tutorial on the free-energy framework for modelling perception and learning.

2017.J Math Psychol, 76(Pt B):198-211.

Free Full Text at Europe PMC

PMC5341759

View PDF (1MB)

Herz DM, Tan H, Brittain JS, Fischer P, Cheeran B, Green AL, Fitzgerald J, Aziz TZ, Ashkan K, Little S, Foltynie T, Limousin P, Zrinzo L, Bogacz R, Brown P

Distinct mechanisms mediate speed-accuracy adjustments in cortico-subthalamic networks.

2017. eLife, 6:e21481

Free Full Text at Europe PMC

PMC5287713

View PDF (4MB)

Kurzawa N, Summerfield C, Bogacz R

Neural Circuits Trained with Standard Reinforcement Learning Can Accumulate Probabilistic Information during Decision Making.

2017.Neural Comput, 29(2):368-393.

Free Full Text at Europe PMC

PMC5462093

View PDF (1MB)

Mikhael JG, Bogacz R

Learning Reward Uncertainty in the Basal Ganglia.

2016.PLoS Comput. Biol., 12(9):e1005062.

Free Full Text at Europe PMC

PMC5010205

View PDF (3MB)

Bogacz R, Martin Moraud E, Abdi A, Magill PJ, Baufreton J

Properties of Neurons in External Globus Pallidus Can Support Optimal Action Selection.

2016.PLoS Comput. Biol., 12(7):e1005004.

Free Full Text at Europe PMC

PMC4936724

View PDF (3MB)

Herz DM, Zavala B, Bogacz R, Brown P

Neural Correlates of Decision Thresholds in the Human Subthalamic Nucleus.

2016.Curr. Biol., 26(7):916-20.

Free Full Text at Europe PMC

PMC4826434

View PDF (2MB)

Syed EC, Grima LL, Magill PJ, Bogacz R, Brown P, Walton ME

Action initiation shapes mesolimbic dopamine encoding of future rewards.

2016.Nat. Neurosci., 19(1):34-6.

Free Full Text at Europe PMC

PMC4697363

View PDF (1MB)

Pavlides A, Hogan SJ, Bogacz R

Computational Models Describing Possible Mechanisms for Generation of Excessive Beta Oscillations in Parkinson's Disease.

2015.PLoS Comput. Biol., 11(12):e1004609.

Free Full Text at Europe PMC

PMC4684204

View PDF (3MB)

Grogan J, Bogacz R, Tsivos D, Whone AL, Coulthard EJ

Dopamine and Consolidation of Episodic Memory: Timing Is Everything.

2015.J Cogn Neurosci, 27(10):2035-50.

Free Full Text at Europe PMC

PMC4880040

View PDF (1MB)

Keuken MC, Van Maanen L, Bogacz R, Schäfer A, Neumann J, Turner R, Forstmann BU

The subthalamic nucleus during decision-making with multiple alternatives.

2015.Hum Brain Mapp, 36(10):4041-4052.

Free Full Text at Europe PMC

PMC4896390

View PDF (1MB)

Dodson PD, Larvin JT, Duffell JM, Garas FN, Doig NM, Kessaris N, Duguid IC, Bogacz R, Butt SJ, Magill PJ

Distinct developmental origins manifest in the specialized encoding of movement by adult neurons of the external globus pallidus.

2015. Neuron, 86(2):501-13.

Free Full Text at Europe PMC

PMC4416107

View PDF (5MB)

Onslow AC, Jones MW, Bogacz R

A canonical circuit for generating phase-amplitude coupling.

2014.PLoS ONE, 9(8):e102591.

Free Full Text at Europe PMC

PMC4138025

View PDF (3MB)

Nevado-Holgado AJ, Mallet N, Magill PJ, Bogacz R

Effective connectivity of the subthalamic nucleus-globus pallidus network during Parkinsonian oscillations.

2014.J. Physiol. (Lond.), 592(7):1429-55.

Free Full Text at Europe PMC

PMC3979604

View PDF (2MB)

Green N, Bogacz R, Huebl J, Beyer AK, Kühn AA, Heekeren HR

Reduction of influence of task difficulty on perceptual decision making by STN deep brain stimulation.

2013.Curr. Biol., 23(17):1681-4.

View PDF (1MB)

Cassey TC, Evens DR, Bogacz R, Marshall JA, Ludwig CJ

Adaptive sampling of information in perceptual decision-making.

2013.PLoS ONE, 8(11):e78993.

Free Full Text at Europe PMC

PMC3842256

View PDF (1MB)

Marshall JA, Bogacz R, Gilchrist ID

Consistent implementation of decisions in the brain.

2012.PLoS ONE, 7(9):e43443.

Free Full Text at Europe PMC

PMC3440404

View PDF (1MB)

Lloyd K, Becker N, Jones MW, Bogacz R

Learning to use working memory: a reinforcement learning gating model of rule acquisition in rats.

2012.Front Comput Neurosci, 6():87.

Free Full Text at Europe PMC

PMC3483721

View PDF (2MB)

Pavlides A, Hogan SJ, Bogacz R

Improved conditions for the generation of beta oscillations in the subthalamic nucleus--globus pallidus network.

2012.Eur. J. Neurosci., 36(2):2229-39.

View PDF (3MB)

Coulthard EJ, Bogacz R, Javed S, Mooney LK, Murphy G, Keeley S, Whone AL

Distinct roles of dopamine and subthalamic nucleus in learning and probabilistic decision making.

2012.Brain, 135(Pt 12):3721-34.

Free Full Text at Europe PMC

PMC3525052

View PDF (1MB)

Nevado-Holgado AJ, Terry JR, Bogacz R

Bifurcation analysis points towards the source of beta neuronal oscillations in Parkinson's disease

2011. , (): .

View PDF (2MB)

Howard-Jones PA, Demetriou S, Bogacz R, Yoo JH, Leonards U

Toward a Science of Learning Games

2011. Brain, Mind and Education, 5(1): 33–41.

View PDF (1MB)

Bogacz R, Larsen T

Integration of reinforcement learning and optimal decision-making theories of the basal ganglia.

2011.Neural Comput, 23(4):817-51.

View PDF (1MB)

Lulham A, Bogacz R, Vogt S, Brown MW

An Infomax algorithm can perform both familiarity discrimination and feature extraction in a single network.

2011.Neural Comput, 23(4):909-26.

View PDF (1MB)

Kucewicz MT, Tricklebank MD, Bogacz R, Jones MW

Dysfunctional prefrontal cortical network activity and interactions following cannabinoid receptor activation.

2011.J. Neurosci., 31(43):15560-8.

View PDF (3MB)

Onslow AC, Bogacz R, Jones MW

Quantifying phase-amplitude coupling in neuronal network oscillations.

2011.Prog. Biophys. Mol. Biol., 105(1-2):49-57.

View PDF (1MB)

Zhang J, Bogacz R

Bounded Ornstein–Uhlenbeck models for two-choice time controlled tasks

2010. J Math Psychol, 54(3): 322–333.

View PDF (1MB)

Bogacz R, Wagenmakers EJ, Forstmann BU, Nieuwenhuis S

The neural basis of the speed-accuracy tradeoff.

2010.Trends Neurosci., 33(1):10-6.

View PDF (1MB)

Bogacz R, Hu PT, Holmes P, Cohen JD

Do humans produce the speed-accuracy trade-off that maximizes reward rate?

2010.Q J Exp Psychol (Hove), 63(5):863-91.

Free Full Text at Europe PMC

PMC2908414

View PDF (1MB)

Forstmann BU, Anwander A, Schäfer A, Neumann J, Brown S, Wagenmakers EJ, Bogacz R, Turner R

Cortico-striatal connections predict control over speed and accuracy in perceptual decision making.

2010.Proc. Natl. Acad. Sci. U.S.A., 107(36):15916-20.

Free Full Text at Europe PMC

PMC2936628

View PDF (1MB)

Howard-Jones PA, Bogacz R, Yoo JH, Leonards U, Demetriou S

The neural mechanisms of learning from competitors.

2010.Neuroimage, 53(2):790-9.

View PDF (1MB)

Zhang J, Bogacz R

Optimal decision making on the basis of evidence represented in spike trains.

2010.Neural Comput, 22(5):1113-48.

View PDF (1MB)

Larsen T, Bogacz R

Initiation and termination of integration in a decision process.

2010.Neural Netw, 23(3):322-33.

View PDF (5MB)

Larsen T, Leslie DS, Collins EJ, Bogacz R

Posterior weighted reinforcement learning with state uncertainty.

2010.Neural Comput, 22(5):1149-79.

View PDF (1MB)

Holgado AJ, Terry JR, Bogacz R

Conditions for the generation of beta oscillations in the subthalamic nucleus-globus pallidus network.

2010.J. Neurosci., 30(37):12340-52.

View PDF (3MB)

Zacksenhouse M, Bogacz R, Holmes P

Robust versus optimal strategies for two-alternative forced choice tasks.

2010.J Math Psychol, 54(2):230-246.

Free Full Text at Europe PMC

PMC3505075

View PDF (1MB)

Bogacz R

Optimal decision-making theories. In: Handbook of reward and decision making

Handbook of reward and decision making (pp. 373-397). Academic Press.

View PDF (1MB)

Zhang J, Bogacz R, Holmes P

A comparison of bounded diffusion models for choice in time controlled tasks.

2009.J Math Psychol, 53(4):231-241.

Free Full Text at Europe PMC

PMC2757788

View PDF (4MB)

Marshall JA, Bogacz R, Dornhaus A, Planqué R, Kovacs T, Franks NR

On optimal decision-making in brains and social insect colonies.

2009.J R Soc Interface, 6(40):1065-74.

Free Full Text at Europe PMC

PMC2827444

View PDF (1MB)

Zhang J, Bogacz R

Superior Colliculus and Basal Ganglia Control the Saccadic Response in Motion Discrimination Tasks

2008. , (): 475-479 .

View PDF (1MB)

Bogacz R

Optimal decision making in the cortico-basal-ganglia circuit

2008 Invited Address, IUPsyS Invited Symposium, Invited Symposium, Symposium, Paper Session, Poster Session, International Journal of Psychology, 43:3-4, 348-527

View PDF (3MB)

Trimmer PC, Houston AI, Marshall JA, Bogacz R, Paul ES, Mendl MT, McNamara JM

Mammalian choices: combining fast-but-inaccurate and slow-but-accurate decision-making systems.

2008.Proc. Biol. Sci., 275(1649):2353-61.

Free Full Text at Europe PMC

PMC2603220

View PDF (1MB)

Androulidakis Z, Lulham A, Bogacz R, Brown MW

Computational models can replicate the capacity of human recognition memory.

2008.Network, 19(3):161-82.

View PDF (1MB)

Bogacz R

Optimal decision-making theories: linking neurobiology with behaviour.

2007.Trends Cogn. Sci. (Regul. Ed.), 11(3):118-25.

View PDF (1MB)

Yeung N, Bogacz R, Holroyd CB, Nieuwenhuis S, Cohen JD

Theta phase resetting and the error-related negativity.

2007.Psychophysiology, 44(1):39-49.

View PDF (1MB)

Bogacz R, Usher M, Zhang J, McClelland JL

Extending a biologically inspired model of choice: multi-alternatives, nonlinearity and value-based multidimensional choice.

2007.Philos. Trans. R. Soc. Lond., B, Biol. Sci., 362(1485):1655-70.

Free Full Text at Europe PMC

PMC2440778

View PDF (1MB)

Bogacz R

Optimal decision network with distributed representation.

2007.Neural Netw, 20(5):564-76.

View PDF (1MB)

Bogacz R, Gurney K

The basal ganglia and cortex implement optimal decision making between alternative actions.

2007.Neural Comput, 19(2):442-77.

View PDF (1MB)

Bogacz R, McClure SM, Li J, Cohen JD, Montague PR

Short-term memory traces for action bias in human reinforcement learning.

2007.Brain Res., 1153():111-21.

View PDF (1MB)

Anjum S, Bogacz R, Tucci T

Model of Reinforcement Learning in the Mouse Reaching and Grasping Experiment

2006. Proceedings of AISB'06: Adaption in Articial and Biological Systems, 1(): 30–36.

View PDF (6MB)

Bogacz R, Brown E, Moehlis J, Holmes P, Cohen JD

The physics of optimal decision making: a formal analysis of models of performance in two-alternative forced-choice tasks.

2006.Psychol Rev, 113(4):700-65.

View PDF (2MB)

Holmes P, Shea-Brown E, Moehlis J, Bogacz R, Gao J, Aston-Jones G, Clayton E, Rajkowski J, Cohen JD

Optimal decisions: From neural spikes, through stochastic differential equations, to behavior

2005. IEICA Trans. Fundamentals, 88(10): 2495–2503.

View PDF (1MB)

Yeung N, Bogacz R, Holroyd CB, Cohen JD

Detection of synchronized oscillations in the electroencephalogram: an evaluation of methods.

2004.Psychophysiology, 41(6):822-32.

View PDF (2MB)

Bogacz R, Cohen JD

Parameterization of connectionist models.

2004.Behav Res Methods Instrum Comput, 36(4):732-41.

View PDF (1MB)

Bogacz R, Brown MW

An anti-Hebbian model of familiarity discrimination in the perirhinal cortex

2003. Neurocomputing, 52(4): 1–6.

View PDF (1MB)

Bogacz R, Brown MW

Comparison of computational models of familiarity discrimination in the perirhinal cortex.

2003.Hippocampus, 13(4):494-524.

View PDF (1MB)

Bogacz R, Brown MW

Capacity of perirhinal cortex network for recognising frequently repeating stimuli

2002. Neurocomputing, 44(6): 337–342.

View PDF (1MB)

Bogacz R, Brown MW

The restricted influence of sparseness of coding on the capacity of familiarity discrimination networks.

2002.Network, 13(4):457-85.

View PDF (1MB)

Bogacz R, Brown MW, Giraud-Carrier C

Frequency-based error back-propagation in a cortical network

2001. , 2(): 211–216.

View PDF (1MB)

Bogacz R, Brown MW, Giraud-Carrier C

Emergence of Movement Sensitive Neurons' Properties by Learning a Sparse Code for Natural Moving Images

2001. Advances in Neural Information Processing Systems 13, (): 838-844.

View PDF (1MB)

Bogacz R, Brown MW, Giraud-Carrier C

A familiarity discrimination algorithm inspired by computations of the perirhinal cortex

2001. , (): 428-441.

View PDF (1MB)

Bogacz R, Brown MW, Giraud-Carrier C

Model of co-operation between recency, familiarity and novelty neurons in the perirhinal cortex

2001. Neurocomputing, 38–40(): 1121-1126.

View PDF (1MB)

Bogacz R, Giraud-Carrier C

A Novel Modular Neural Architecture for Rule-Based and Similarity-Based Reasoning

2000.Hybrid Neural Systems, LNAI 1778, pp. 63–77

View PDF (1MB)

Bogacz R

Implementing Knowledge Database in Neural Networks

Proceedings of the 2nd Conference on Neural Networks and Their Applications, Szczyrk, pp. 66-71

View PDF (1MB)

Papers for Rafal Bogacz

2026

Dithering suppresses half-harmonic neural synchronisation to photic stimulation in humans.

Bidirectional Predictive Coding

2025

Benchmarking Predictive Coding Networks - Made Simple

Predictive Coding Model Detects Novelty on Different Levels of Representation Hierarchy.

Dopamine encodes deep network teaching signals for individual learning trajectories.

Response of neuronal populations to phase-locked stimulation: model-based predictions and validation.

2024

Patent Application: Neural source localisation for optimisation of deep brain stimulation

Bayesian confidence in optimal decisions.

Reward Bases: A simple mechanism for adaptive acquisition of multiple reward types.

Learning probability distributions of sensory inputs with Monte Carlo predictive coding.

Temporal regularities shape perceptual decisions and striatal dopamine signals.

How to design optimal brain stimulation to modulate phase-amplitude coupling?

Dopamine encoding of novelty facilitates efficient uncertainty-driven exploration.

Predictive coding networks for temporal prediction.

Patent Application: Selective Entrainment of Neural Rhythms by Neural Stimulation

A Stable, Fast, and Fully Automatic Learning Algorithm for Predictive Coding Networks

Inferring neural activity before plasticity as a foundation for learning beyond backpropagation.

2023

Sequential Memory with Temporal Predictive Coding.

A Theoretical Framework for Inference and Learning in Predictive Coding Networks

Backpropagation at the Infinitesimal Inference Limit of Energy-Based Models: Unifying Predictive Coding, Equilibrium Propagation, and Contrastive Hebbian Learning

Expressions for Bayesian confidence of drift diffusion observers in fluctuating stimuli tasks

Sub-harmonic entrainment of cortical gamma oscillations to deep brain stimulation in Parkinson's disease: Model based predictions and validation in three human subjects.

Dynamic modulation of subthalamic nucleus activity facilitates adaptive behavior.

Recurrent predictive coding models for associative memory employing covariance learning.

Gambling on an empty stomach: Hunger modulates preferences for learned but not described risks.

How to entrain a selected neuronal rhythm but not others: open-loop dithered brain stimulation for selective entrainment.

2022

Learning on Arbitrary Graph Topologies via Predictive Coding

Universal Hopfield Networks: A General Framework for Single-Shot Associative Memory Models

Dynamic control of decision and movement speed in the human basal ganglia.

Reverse Differentiation via Predictive Coding

Conflict Detection in a Sequential Decision Task Is Associated with Increased Cortico-Subthalamic Coherence and Prolonged Subthalamic Oscillatory Response in the β Band.

Uncertainty-guided learning with scaled prediction errors in the basal ganglia.

Patent Application: Deep brain stimulation

A Normative Account of Confirmation Bias During Reinforcement Learning.

2021

Case Report: Embedding "Digital Chronotherapy" Into Medical Devices-A Canine Validation for Controlling Status Epilepticus Through Multi-Scale Rhythmic Brain Stimulation.

Associative Memories via Predictive Coding.

Hunger improves reinforcement-driven but not planned action.

Neural signatures of hyperdirect pathway activity in Parkinson's disease.

An association between prediction errors and risk-seeking: Theory and behavioral evidence.

Optimal closed-loop deep brain stimulation using multiple independently controlled contacts

Average beta burst duration profiles provide a signature of dynamical changes between the ON and OFF medication states in Parkinson's disease.

Optimizing deep brain stimulation based on isostable amplitude in essential tremor patient models.

2020

Can the Brain Do Backpropagation? -Exact Implementation of Backpropagation in Predictive Coding Networks.

Dopamine role in learning and action inference.

Modeling the effects of motivation on choice and learning in the basal ganglia.

Phase-dependence of response curves to deep brain stimulation and their relationship: from essential tremor patient data to a Wilson-Cowan model.

2019

A deep learning framework for neuroscience.

Predicting the effects of deep brain stimulation using a reduced coupled oscillator model.

Learning the payoffs and costs of actions.

Theories of Error Back-Propagation in the Brain.

2018

Predicting beta bursts from local field potentials to improve closed-loop DBS paradigms in Parkinson’s patients

Selective Effects of the Loss of NMDA or mGluR5 Receptors in the Reward System on Adaptive Decision-Making.

Time-varying decision boundaries: insights from optimality analysis.

Deep Brain Stimulation of the Subthalamic Nucleus Does Not Affect the Decrease of Decision Threshold during the Choice Process When There Is No Conflict, Time Pressure, or Reward.

Dendritic Integration of Sensory Evidence in Perceptual Decision-Making.

Mechanisms Underlying Decision-Making as Revealed by Deep-Brain Stimulation in Patients with Parkinson's Disease.

2017

Effects of dopamine on reinforcement learning and consolidation in Parkinson's disease.

Overcoming indecision by changing the decision boundary.

The Cognitive Role of the Globus Pallidus interna; Insights from Disease States.

An Approximation of the Error Backpropagation Algorithm in a Predictive Coding Network with Local Hebbian Synaptic Plasticity.

A tutorial on the free-energy framework for modelling perception and learning.

Distinct mechanisms mediate speed-accuracy adjustments in cortico-subthalamic networks.

Neural Circuits Trained with Standard Reinforcement Learning Can Accumulate Probabilistic Information during Decision Making.

2016

Learning Reward Uncertainty in the Basal Ganglia.

Properties of Neurons in External Globus Pallidus Can Support Optimal Action Selection.

Neural Correlates of Decision Thresholds in the Human Subthalamic Nucleus.

Action initiation shapes mesolimbic dopamine encoding of future rewards.

2015